SEQUENCE MOTIF - CONCEPT

BUILD PROFILE:  Use these rules to build the Profile below from the 7
aligned Protein sequences.
1.  If fewer than 3 amino acid possibilities at a position include ALL three.
2.  If 4 or more, put an X at that position.

Length (6 to 10):

 

   

Protein 1   Q   G   A   E   Q   T  
Protein 2   W   G   A   E   Q   T  
Protein 3   D   E   A   E   Q   T  
Protein 4   K   E   A   E   Q   T  
Protein 5   T   E   A   E   Q   T  
Protein 6   G   G   A   E   Q   T  
Protein 7   P   G   A   E   Q   T  
 

Profile :

  x - [EG] - A - E - Q - T  

The following protein sequences match the profile:

     
Sequence 1    H    E    A    E    Q    T  
Sequence 2    S    G    A    E    Q    T  
Sequence 3    F    E    A    E    Q    T  
Sequence 4    Y    E    A    E    Q    T  
Sequence 5    Y    G    A    E    Q    T